Package: CliquePercolation 0.4.0

CliquePercolation: Clique Percolation for Networks

Clique percolation community detection for weighted and unweighted networks as well as threshold and plotting functions. For more information see Farkas et al. (2007) <doi:10.1088/1367-2630/9/6/180> and Palla et al. (2005) <doi:10.1038/nature03607>.

Authors:Jens Lange [aut, cre], Janis Zickfeld [ctb], Alexander P. Christensen [ctb], Pedro Henrique Ribeiro Santiago [ctb]

CliquePercolation_0.4.0.tar.gz
CliquePercolation_0.4.0.zip(r-4.7-any)CliquePercolation_0.4.0.zip(r-4.6-any)CliquePercolation_0.4.0.zip(r-4.5-any)
CliquePercolation_0.4.0.tgz(r-4.6-any)CliquePercolation_0.4.0.tgz(r-4.5-any)
CliquePercolation_0.4.0.tar.gz(r-4.7-any)CliquePercolation_0.4.0.tar.gz(r-4.6-any)
CliquePercolation_0.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CliquePercolation/json (API)

# Install 'CliquePercolation' in R:

install.packages('CliquePercolation', repos = c('https://langejens.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/langejens/cliquepercolation/issues

Datasets:

immuno - Data: Immunoglobulin interaction network
Obama - Data: Evaluative Reactions Toward Barack Obama

On CRAN:

5.40 score 4 stars 1 packages 14 scripts 306 downloads 1 mentions 8 exports 129 dependencies

Last updated from:61076894b8. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	172
source / vignettes	OK	262
linux-release-x86_64	OK	181
macos-release-arm64	OK	182
macos-oldrel-arm64	OK	144
windows-devel	OK	89
windows-release	OK	108
windows-oldrel	OK	94
wasm-release	OK	165

Exports:cpAlgorithm cpColoredGraph cpCommunityGraph cpCommunitySizeDistribution cpPermuteEntropy cpThreshold FuzzyMod SignedFuzzyMod

Dependencies:abind askpass backports base64enc bslib cachem checkmate cli cluster colorspace commonmark conflicted corpcor cpp11 crosstalk curl data.table deldir DEoptimR digest dplyr ellipse evaluate farver fastmap fdrtool fontawesome foreign Formula fs generics ggplot2 glasso glue GPArotation gridExtra gtable gtools highr Hmisc htmlTable htmltools htmlwidgets httpuv httr igraph interp isoband jpeg jquerylib jsonlite kableExtra knitr labeling later lattice latticeExtra lavaan lazyeval leaps lessR lifecycle magrittr MASS Matrix maxLik memoise mime miscTools mnormt nlme nnet numDeriv ohenery openssl openxlsx otel pbapply pbivnorm pillar pkgconfig plotly plyr png Polychrome promises psych purrr qgraph quadprog R6 rappdirs RColorBrewer Rcpp RcppEigen reshape2 rlang rmarkdown robustbase rpart rstudioapi S7 sandwich sass scales scatterplot3d shiny sourcetools stringi stringr svglite sys systemfonts textshaping tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun xml2 xtable xts yaml zip zoo

CliquePercolation

Rendered fromCliquePercolation.Rmdusingknitr::rmarkdown

Last update: 2022-11-08
Started: 2019-10-31

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Clique Percolation Community Detection	cpAlgorithm
Colored Network According To Clique Percolation Communities	cpColoredGraph
Plotting Clique Percolation Community Network	cpCommunityGraph
Plotting Clique Percolation Community Size Distribution	cpCommunitySizeDistribution
Confidence Intervals Of Entropy Based On Random Permutations Of Network	cpPermuteEntropy
Optimizing 'k' And 'I' For Clique Percolation Community Detection	cpThreshold
Fuzzy Modularity of a community structure of a graph	FuzzyMod
Data: Immunoglobulin interaction network	immuno
Data: Evaluative Reactions Toward Barack Obama (2012)	Obama
print.cpAlgorithm	print.cpAlgorithm
print.cpPermuteEntropy	print.cpPermuteEntropy
Signed Fuzzy Modularity of a community structure of a graph	SignedFuzzyMod
summary.cpAlgorithm	summary.cpAlgorithm